Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcr5Q04683 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr5Q04683 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm23935-201ENSMUST00000102303 57 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm24270-201ENSMUST00000102326 57 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm24245-201ENSMUST00000157318 57 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.56□□□□□ -0.4
Cxcr5Q04683 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcr5Q04683 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.55□□□□□ -0.4
Cxcr5Q04683 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.55□□□□□ -0.4
Cxcr5Q04683 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.55□□□□□ -0.4
Cxcr5Q04683 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.55□□□□□ -0.4
Cxcr5Q04683 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.55□□□□□ -0.4
Cxcr5Q04683 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr5Q04683 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.54□□□□□ -0.4
Cxcr5Q04683 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gm43575-201ENSMUST00000196420 516 ntBASIC12.54□□□□□ -0.4
Cxcr5Q04683 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcr5Q04683 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms