Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig3P97386 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.45□□□□□ -0.1
Lig3P97386 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.44□□□□□ -0.1
Lig3P97386 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lig3P97386 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.44□□□□□ -0.1
Lig3P97386 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.44□□□□□ -0.1
Lig3P97386 Gm43818-201ENSMUST00000200605 466 ntBASIC14.44□□□□□ -0.1
Lig3P97386 Gm19078-201ENSMUST00000206311 727 ntBASIC14.44□□□□□ -0.1
Lig3P97386 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lig3P97386 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lig3P97386 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Lig3P97386 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Lig3P97386 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig3P97386 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.43□□□□□ -0.1
Lig3P97386 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Lig3P97386 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.43□□□□□ -0.1
Lig3P97386 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.43□□□□□ -0.1
Lig3P97386 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.43□□□□□ -0.1
Lig3P97386 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Gm15240-201ENSMUST00000118156 720 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Gm24644-201ENSMUST00000157114 139 ntBASIC14.43□□□□□ -0.1
Lig3P97386 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Gm4857-201ENSMUST00000192718 785 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.43□□□□□ -0.1
Lig3P97386 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Gm18905-201ENSMUST00000205454 928 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Gm45880-201ENSMUST00000213041 853 ntBASIC14.43□□□□□ -0.1
Lig3P97386 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig3P97386 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lig3P97386 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lig3P97386 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Lig3P97386 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lig3P97386 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lig3P97386 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Lig3P97386 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Lig3P97386 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig3P97386 Gm11524-201ENSMUST00000119349 807 ntBASIC14.42□□□□□ -0.1
Lig3P97386 Gm13350-201ENSMUST00000120519 479 ntBASIC14.42□□□□□ -0.1
Lig3P97386 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.42□□□□□ -0.1
Lig3P97386 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig3P97386 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms