Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Mir698-201ENSMUST00000102164 109 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43bP86448 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43bP86448 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Trim43bP86448 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim43bP86448 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Gm42612-201ENSMUST00000197986 623 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Gm43170-201ENSMUST00000199827 612 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim43bP86448 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Mir497b-201ENSMUST00000093601 125 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43bP86448 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.6□□□□□ -0.23
Trim43bP86448 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43bP86448 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43bP86448 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim43bP86448 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Gm15678-201ENSMUST00000117573 960 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim43bP86448 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim43bP86448 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 Gm8515-201ENSMUST00000194852 576 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim43bP86448 Gm18018-201ENSMUST00000198273 408 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim43bP86448 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43bP86448 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim43bP86448 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43bP86448 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim43bP86448 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim43bP86448 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43bP86448 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.59□□□□□ -0.23
Trim43bP86448 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43bP86448 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43bP86448 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43bP86448 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43bP86448 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43bP86448 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.58□□□□□ -0.23
Trim43bP86448 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.58□□□□□ -0.24
Trim43bP86448 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim43bP86448 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim43bP86448 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim43bP86448 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trim43bP86448 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim43bP86448 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.58□□□□□ -0.24
Trim43bP86448 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.58□□□□□ -0.24
Trim43bP86448 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trim43bP86448 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms