Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Shox2P70390 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.02□□□□□ -0.32
Shox2P70390 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Shox2P70390 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.02□□□□□ -0.32
Shox2P70390 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Shox2P70390 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.02□□□□□ -0.32
Shox2P70390 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.02□□□□□ -0.32
Shox2P70390 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shox2P70390 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gm6912-201ENSMUST00000117218 544 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Gm28033-201ENSMUST00000184224 96 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Gm38225-201ENSMUST00000194001 393 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.02□□□□□ -0.33
Shox2P70390 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.02□□□□□ -0.33
Shox2P70390 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.02□□□□□ -0.33
Shox2P70390 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.02□□□□□ -0.33
Shox2P70390 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Shox2P70390 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Shox2P70390 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shox2P70390 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.02□□□□□ -0.33
Shox2P70390 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Shox2P70390 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.02□□□□□ -0.33
Shox2P70390 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Shox2P70390 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shox2P70390 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Shox2P70390 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.01□□□□□ -0.33
Shox2P70390 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shox2P70390 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.01□□□□□ -0.33
Shox2P70390 Gm12428-201ENSMUST00000119844 727 ntBASIC13.01□□□□□ -0.33
Shox2P70390 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.01□□□□□ -0.33
Shox2P70390 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.01□□□□□ -0.33
Shox2P70390 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.01□□□□□ -0.33
Shox2P70390 Gm24420-201ENSMUST00000176676 59 ntBASIC13.01□□□□□ -0.33
Shox2P70390 Gm35960-201ENSMUST00000202712 767 ntBASIC13.01□□□□□ -0.33
Shox2P70390 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shox2P70390 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms