Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.72□□□□□ -0.05
Tpm1P58771 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Tpm1P58771 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Tpm1P58771 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tpm1P58771 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22065-201ENSMUST00000103753 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22066-201ENSMUST00000103761 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24932-201ENSMUST00000103763 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24115-201ENSMUST00000103799 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22190-201ENSMUST00000103827 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22191-201ENSMUST00000103831 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24721-201ENSMUST00000103849 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm28018-201ENSMUST00000103869 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm26399-201ENSMUST00000103937 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Tpm1P58771 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Gm8410-201ENSMUST00000117225 605 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm12428-201ENSMUST00000119844 727 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.71□□□□□ -0.05
Tpm1P58771 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25349-201ENSMUST00000177728 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm23616-201ENSMUST00000177797 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25871-201ENSMUST00000177816 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24752-201ENSMUST00000178240 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24496-201ENSMUST00000178287 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25649-201ENSMUST00000178476 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25548-201ENSMUST00000178681 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm23147-201ENSMUST00000178841 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm26095-201ENSMUST00000179270 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22171-201ENSMUST00000179283 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm23936-201ENSMUST00000179354 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm22619-201ENSMUST00000179516 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25255-201ENSMUST00000179579 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24755-201ENSMUST00000179691 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm26506-201ENSMUST00000179692 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm25086-201ENSMUST00000179931 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm23243-201ENSMUST00000180047 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24659-201ENSMUST00000180212 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm24169-201ENSMUST00000180244 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm23689-201ENSMUST00000180354 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm27359-201ENSMUST00000184153 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm27785-201ENSMUST00000184268 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm27466-201ENSMUST00000184396 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm27703-201ENSMUST00000184836 110 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 Gm27741-201ENSMUST00000185060 237 ntBASIC14.71□□□□□ -0.05
Tpm1P58771 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.71□□□□□ -0.05
Tpm1P58771 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Tpm1P58771 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tpm1P58771 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tpm1P58771 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.71□□□□□ -0.05
Tpm1P58771 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tpm1P58771 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tpm1P58771 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Tpm1P58771 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tpm1P58771 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tpm1P58771 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.71□□□□□ -0.06
Tpm1P58771 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tpm1P58771 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.7□□□□□ -0.06
Tpm1P58771 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Gm8000-201ENSMUST00000188378 592 ntBASIC14.7□□□□□ -0.06
Tpm1P58771 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.7□□□□□ -0.06
Tpm1P58771 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.7□□□□□ -0.06
Tpm1P58771 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tpm1P58771 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms