Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Mir449b-201ENSMUST00000104833 80 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.67□□□□□ -0.7
Sssca1P56873 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm27772-201ENSMUST00000184900 187 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Gm44771-201ENSMUST00000206975 626 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sssca1P56873 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sssca1P56873 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sssca1P56873 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.66□□□□□ -0.7
Sssca1P56873 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sssca1P56873 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.66□□□□□ -0.7
Sssca1P56873 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm3436-201ENSMUST00000179930 840 ntBASIC10.66□□□□□ -0.7
Sssca1P56873 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.66□□□□□ -0.7
Sssca1P56873 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.66□□□□□ -0.7
Sssca1P56873 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm18905-201ENSMUST00000205454 928 ntBASIC10.66□□□□□ -0.7
Sssca1P56873 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.66□□□□□ -0.7
Sssca1P56873 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.66□□□□□ -0.7
Sssca1P56873 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sssca1P56873 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sssca1P56873 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sssca1P56873 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms