Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SmoP56726 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SmoP56726 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SmoP56726 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.25□□□□□ -0.29
SmoP56726 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.25□□□□□ -0.29
SmoP56726 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.25□□□□□ -0.29
SmoP56726 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Gm5187-201ENSMUST00000117317 991 ntBASIC13.25□□□□□ -0.29
SmoP56726 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.25□□□□□ -0.29
SmoP56726 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.25□□□□□ -0.29
SmoP56726 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Snora73a-201ENSMUST00000082453 205 ntBASIC13.25□□□□□ -0.29
SmoP56726 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.25□□□□□ -0.29
SmoP56726 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SmoP56726 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SmoP56726 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.24□□□□□ -0.29
SmoP56726 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.24□□□□□ -0.29
SmoP56726 Gm13392-201ENSMUST00000117708 150 ntBASIC13.24□□□□□ -0.29
SmoP56726 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Gm5370-201ENSMUST00000187187 574 ntBASIC13.24□□□□□ -0.29
SmoP56726 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.24□□□□□ -0.29
SmoP56726 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SmoP56726 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SmoP56726 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
SmoP56726 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
SmoP56726 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.23□□□□□ -0.29
SmoP56726 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SmoP56726 Mir686-201ENSMUST00000102174 109 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms