Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.83□□□□□ -0.52
Abcd3P55096 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Abcd3P55096 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Abcd3P55096 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Abcd3P55096 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Abcd3P55096 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.82□□□□□ -0.52
Abcd3P55096 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.82□□□□□ -0.52
Abcd3P55096 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abcd3P55096 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Abcd3P55096 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Gm44397-201ENSMUST00000195950 113 ntBASIC11.82□□□□□ -0.52
Abcd3P55096 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.82□□□□□ -0.52
Abcd3P55096 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abcd3P55096 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abcd3P55096 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Abcd3P55096 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Abcd3P55096 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Abcd3P55096 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Abcd3P55096 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.81□□□□□ -0.52
Abcd3P55096 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Abcd3P55096 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.81□□□□□ -0.52
Abcd3P55096 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.81□□□□□ -0.52
Abcd3P55096 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.81□□□□□ -0.52
Abcd3P55096 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.81□□□□□ -0.52
Abcd3P55096 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.81□□□□□ -0.52
Abcd3P55096 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Abcd3P55096 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Abcd3P55096 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Abcd3P55096 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abcd3P55096 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms