Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nub1P54729 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nub1P54729 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.24□□□□□ -0.13
Nub1P54729 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Nub1P54729 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nub1P54729 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nub1P54729 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.23□□□□□ -0.13
Nub1P54729 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.23□□□□□ -0.13
Nub1P54729 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nub1P54729 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nub1P54729 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nub1P54729 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.22□□□□□ -0.13
Nub1P54729 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.22□□□□□ -0.13
Nub1P54729 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nub1P54729 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Gm6447-201ENSMUST00000118905 835 ntBASIC14.22□□□□□ -0.13
Nub1P54729 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.22□□□□□ -0.13
Nub1P54729 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.22□□□□□ -0.13
Nub1P54729 Gm11424-201ENSMUST00000121929 829 ntBASIC14.22□□□□□ -0.13
Nub1P54729 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.22□□□□□ -0.13
Nub1P54729 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nub1P54729 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Nub1P54729 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nub1P54729 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nub1P54729 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nub1P54729 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nub1P54729 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nub1P54729 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nub1P54729 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.21□□□□□ -0.13
Nub1P54729 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.21□□□□□ -0.13
Nub1P54729 Gm45841-201ENSMUST00000207700 164 ntBASIC14.21□□□□□ -0.13
Nub1P54729 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Gm18041-201ENSMUST00000218210 618 ntBASIC14.21□□□□□ -0.13
Nub1P54729 Gm18473-201ENSMUST00000220543 868 ntBASIC14.21□□□□□ -0.13
Nub1P54729 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.21□□□□□ -0.13
Nub1P54729 Itm2b-204ENSMUST00000228637 783 ntBASIC14.21□□□□□ -0.13
Nub1P54729 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.21□□□□□ -0.13
Nub1P54729 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms