Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.6■□□□□ 0.25
Msh6P54276 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Msh6P54276 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.6■□□□□ 0.25
Msh6P54276 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.6■□□□□ 0.25
Msh6P54276 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.6■□□□□ 0.25
Msh6P54276 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Msh6P54276 Mir6979-201ENSMUST00000183927 56 ntBASIC16.6■□□□□ 0.25
Msh6P54276 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Msh6P54276 Gm31256-201ENSMUST00000194705 506 ntBASIC16.6■□□□□ 0.25
Msh6P54276 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.6■□□□□ 0.25
Msh6P54276 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
Msh6P54276 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh6P54276 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.59■□□□□ 0.25
Msh6P54276 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.59■□□□□ 0.25
Msh6P54276 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Msh6P54276 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Msh6P54276 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.59■□□□□ 0.25
Msh6P54276 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Gm25214-201ENSMUST00000104573 129 ntBASIC16.59■□□□□ 0.25
Msh6P54276 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Gm22902-201ENSMUST00000158488 302 ntBASIC16.59■□□□□ 0.25
Msh6P54276 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Msh6P54276 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Msh6P54276 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msh6P54276 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Msh6P54276 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.59■□□□□ 0.25
Msh6P54276 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Msh6P54276 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Msh6P54276 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Msh6P54276 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Msh6P54276 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh6P54276 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh6P54276 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Msh6P54276 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh6P54276 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msh6P54276 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.58■□□□□ 0.25
Msh6P54276 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
Msh6P54276 Gm14028-201ENSMUST00000117434 479 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Gm14704-201ENSMUST00000120300 874 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 AA914427-201ENSMUST00000193194 1166 ntBASIC16.58■□□□□ 0.24
Msh6P54276 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.58■□□□□ 0.24
Msh6P54276 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.58■□□□□ 0.24
Msh6P54276 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.58■□□□□ 0.24
Msh6P54276 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msh6P54276 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms