Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.21□□□□□ -0.3
Fdft1P53798 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.21□□□□□ -0.3
Fdft1P53798 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fdft1P53798 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fdft1P53798 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fdft1P53798 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.21□□□□□ -0.3
Fdft1P53798 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Fdft1P53798 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm12403-201ENSMUST00000121384 959 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm26464-201ENSMUST00000157094 305 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Fdft1P53798 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fdft1P53798 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fdft1P53798 Syt7-205ENSMUST00000224135 1557 ntBASIC13.2□□□□□ -0.3
Fdft1P53798 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Fdft1P53798 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fdft1P53798 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.19□□□□□ -0.3
Fdft1P53798 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Fdft1P53798 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fdft1P53798 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Fdft1P53798 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.19□□□□□ -0.3
Fdft1P53798 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.19□□□□□ -0.3
Fdft1P53798 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.19□□□□□ -0.3
Fdft1P53798 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Fdft1P53798 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fdft1P53798 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.18□□□□□ -0.3
Fdft1P53798 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
Fdft1P53798 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fdft1P53798 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms