Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.94□□□□□ -0.5
Rfx3P48381 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Rfx3P48381 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Rfx3P48381 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfx3P48381 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfx3P48381 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Rfx3P48381 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfx3P48381 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Rfx3P48381 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.94□□□□□ -0.5
Rfx3P48381 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.93□□□□□ -0.5
Rfx3P48381 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm12151-201ENSMUST00000121374 290 ntBASIC11.93□□□□□ -0.5
Rfx3P48381 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rfx3P48381 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.93□□□□□ -0.5
Rfx3P48381 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.93□□□□□ -0.5
Rfx3P48381 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfx3P48381 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfx3P48381 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.92□□□□□ -0.5
Rfx3P48381 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.92□□□□□ -0.5
Rfx3P48381 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rfx3P48381 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Rfx3P48381 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfx3P48381 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.92□□□□□ -0.5
Rfx3P48381 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms