Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gli1P47806 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.91□□□□□ -0.34
Gli1P47806 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gli1P47806 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.91□□□□□ -0.34
Gli1P47806 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.91□□□□□ -0.34
Gli1P47806 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gli1P47806 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.91□□□□□ -0.34
Gli1P47806 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Gm9899-201ENSMUST00000065519 555 ntBASIC12.91□□□□□ -0.34
Gli1P47806 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gli1P47806 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Gli1P47806 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gli1P47806 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.91□□□□□ -0.34
Gli1P47806 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Gli1P47806 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gli1P47806 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gli1P47806 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gli1P47806 Mir1938-201ENSMUST00000158746 100 ntBASIC12.9□□□□□ -0.34
Gli1P47806 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.9□□□□□ -0.34
Gli1P47806 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.9□□□□□ -0.34
Gli1P47806 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gli1P47806 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.9□□□□□ -0.34
Gli1P47806 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gli1P47806 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gli1P47806 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gli1P47806 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Gli1P47806 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gli1P47806 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gli1P47806 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gli1P47806 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gli1P47806 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Gli1P47806 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gli1P47806 Gm15806-201ENSMUST00000120696 955 ntBASIC12.89□□□□□ -0.35
Gli1P47806 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.89□□□□□ -0.35
Gli1P47806 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Gli1P47806 Gm21854-201ENSMUST00000179901 471 ntBASIC12.89□□□□□ -0.35
Gli1P47806 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.89□□□□□ -0.35
Gli1P47806 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gli1P47806 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms