Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm44855-201ENSMUST00000205725 362 ntBASIC13.42□□□□□ -0.26
Vps4bP46467 Gm19078-201ENSMUST00000206311 727 ntBASIC13.42□□□□□ -0.26
Vps4bP46467 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps4bP46467 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vps4bP46467 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps4bP46467 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vps4bP46467 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.42□□□□□ -0.26
Vps4bP46467 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Vps4bP46467 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Gm26464-201ENSMUST00000157094 305 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps4bP46467 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Gm29667-201ENSMUST00000190817 490 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Gm19931-201ENSMUST00000198920 368 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps4bP46467 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps4bP46467 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.41□□□□□ -0.26
Vps4bP46467 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps4bP46467 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps4bP46467 Gm15487-201ENSMUST00000122373 465 ntBASIC13.4□□□□□ -0.26
Vps4bP46467 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Gm24694-201ENSMUST00000180054 110 ntBASIC13.4□□□□□ -0.26
Vps4bP46467 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps4bP46467 Gm27663-201ENSMUST00000184839 110 ntBASIC13.4□□□□□ -0.26
Vps4bP46467 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.4□□□□□ -0.26
Vps4bP46467 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Vps4bP46467 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps4bP46467 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps4bP46467 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps4bP46467 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Vps4bP46467 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps4bP46467 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps4bP46467 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms