Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdx2P43241 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdx2P43241 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdx2P43241 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.49□□□□□ -0.41
Cdx2P43241 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Gm11439-201ENSMUST00000118598 409 ntBASIC12.49□□□□□ -0.41
Cdx2P43241 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Cdx2P43241 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdx2P43241 Mir6979-201ENSMUST00000183927 56 ntBASIC12.49□□□□□ -0.41
Cdx2P43241 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.49□□□□□ -0.41
Cdx2P43241 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdx2P43241 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Gm25214-201ENSMUST00000104573 129 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Gm14277-201ENSMUST00000121195 360 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 B9d1os-201ENSMUST00000137010 674 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Gm15276-201ENSMUST00000145953 498 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdx2P43241 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdx2P43241 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Cdx2P43241 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.48□□□□□ -0.41
Cdx2P43241 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdx2P43241 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdx2P43241 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx2P43241 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.47□□□□□ -0.41
Cdx2P43241 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.47□□□□□ -0.41
Cdx2P43241 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdx2P43241 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm14130-201ENSMUST00000118417 987 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms