Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox6P40645 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sox6P40645 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox6P40645 Gm9522-201ENSMUST00000182394 926 ntBASIC12.41□□□□□ -0.42
Sox6P40645 Gm2445-201ENSMUST00000182798 989 ntBASIC12.41□□□□□ -0.42
Sox6P40645 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.41□□□□□ -0.42
Sox6P40645 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox6P40645 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox6P40645 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox6P40645 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.41□□□□□ -0.42
Sox6P40645 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Syt7-204ENSMUST00000223586 1344 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.4□□□□□ -0.42
Sox6P40645 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Gm24694-201ENSMUST00000180054 110 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Gm27663-201ENSMUST00000184839 110 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Mir6977-201ENSMUST00000184960 64 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sox6P40645 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox6P40645 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.4□□□□□ -0.42
Sox6P40645 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox6P40645 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox6P40645 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.4□□□□□ -0.43
Sox6P40645 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox6P40645 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sox6P40645 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sox6P40645 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox6P40645 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Mir698-201ENSMUST00000102164 109 ntBASIC12.39□□□□□ -0.43
Sox6P40645 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Gm13385-201ENSMUST00000121089 220 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Gm8927-201ENSMUST00000181978 981 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Gm29667-201ENSMUST00000190817 490 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Gm3222-201ENSMUST00000071282 990 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Mir497b-201ENSMUST00000093601 125 ntBASIC12.39□□□□□ -0.43
Sox6P40645 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms