Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh4P39038 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh4P39038 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh4P39038 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh4P39038 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdh4P39038 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh4P39038 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cdh4P39038 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh4P39038 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh4P39038 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh4P39038 Gm8602-201ENSMUST00000184045 607 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Gm27839-201ENSMUST00000184242 106 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdh4P39038 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cdh4P39038 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Gm16372-201ENSMUST00000073088 450 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.64□□□□□ -0.39
Cdh4P39038 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cdh4P39038 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdh4P39038 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cdh4P39038 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdh4P39038 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh4P39038 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.63□□□□□ -0.39
Cdh4P39038 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh4P39038 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdh4P39038 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh4P39038 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh4P39038 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh4P39038 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.63□□□□□ -0.39
Cdh4P39038 Gm6447-201ENSMUST00000118905 835 ntBASIC12.63□□□□□ -0.39
Cdh4P39038 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdh4P39038 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Cdh4P39038 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh4P39038 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.63□□□□□ -0.39
Cdh4P39038 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.63□□□□□ -0.39
Cdh4P39038 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh4P39038 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms