Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk2P38575 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk2P38575 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk2P38575 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk2P38575 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Upk2P38575 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk2P38575 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Upk2P38575 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Upk2P38575 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.58□□□□□ -0.56
Upk2P38575 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.58□□□□□ -0.56
Upk2P38575 Gm18018-201ENSMUST00000198273 408 ntBASIC11.58□□□□□ -0.56
Upk2P38575 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.58□□□□□ -0.56
Upk2P38575 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Upk2P38575 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk2P38575 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.58□□□□□ -0.56
Upk2P38575 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.58□□□□□ -0.56
Upk2P38575 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.58□□□□□ -0.56
Upk2P38575 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Upk2P38575 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.57□□□□□ -0.56
Upk2P38575 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.57□□□□□ -0.56
Upk2P38575 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Gm2495-201ENSMUST00000191160 466 ntBASIC11.57□□□□□ -0.56
Upk2P38575 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.57□□□□□ -0.56
Upk2P38575 Gm18473-201ENSMUST00000220543 868 ntBASIC11.57□□□□□ -0.56
Upk2P38575 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Upk2P38575 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Upk2P38575 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.57□□□□□ -0.56
Upk2P38575 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk2P38575 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Upk2P38575 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.57□□□□□ -0.56
Upk2P38575 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Upk2P38575 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk2P38575 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk2P38575 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk2P38575 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk2P38575 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk2P38575 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk2P38575 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.56□□□□□ -0.56
Upk2P38575 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.56□□□□□ -0.56
Upk2P38575 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk2P38575 Gm6152-201ENSMUST00000151704 340 ntBASIC11.56□□□□□ -0.56
Upk2P38575 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk2P38575 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms