Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.91□□□□□ -0.18
Rfc1P35601 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Gm29741-201ENSMUST00000192667 421 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Gm44335-201ENSMUST00000196879 141 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Gm44297-201ENSMUST00000198304 141 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Gm44346-201ENSMUST00000198851 141 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Gm18049-201ENSMUST00000208909 581 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.91□□□□□ -0.18
Rfc1P35601 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rfc1P35601 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rfc1P35601 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Rfc1P35601 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.9□□□□□ -0.18
Rfc1P35601 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.9□□□□□ -0.18
Rfc1P35601 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.9□□□□□ -0.18
Rfc1P35601 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rfc1P35601 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.9□□□□□ -0.18
Rfc1P35601 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.9□□□□□ -0.18
Rfc1P35601 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc1P35601 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rfc1P35601 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.89□□□□□ -0.19
Rfc1P35601 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Gm6222-201ENSMUST00000120787 396 ntBASIC13.89□□□□□ -0.19
Rfc1P35601 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.89□□□□□ -0.19
Rfc1P35601 Gm9824-201ENSMUST00000178707 561 ntBASIC13.89□□□□□ -0.19
Rfc1P35601 Gm43474-201ENSMUST00000196415 774 ntBASIC13.89□□□□□ -0.19
Rfc1P35601 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Gm18027-201ENSMUST00000218947 619 ntBASIC13.89□□□□□ -0.19
Rfc1P35601 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfc1P35601 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfc1P35601 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfc1P35601 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfc1P35601 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfc1P35601 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfc1P35601 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms