Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Gm14832-201ENSMUST00000121289 322 ntBASIC14.78□□□□□ -0.04
Col2a1P28481 Gm3096-201ENSMUST00000185770 364 ntBASIC14.78□□□□□ -0.04
Col2a1P28481 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.78□□□□□ -0.04
Col2a1P28481 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.78□□□□□ -0.04
Col2a1P28481 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.78□□□□□ -0.04
Col2a1P28481 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.78□□□□□ -0.04
Col2a1P28481 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.78□□□□□ -0.04
Col2a1P28481 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.78□□□□□ -0.04
Col2a1P28481 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col2a1P28481 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Col2a1P28481 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.77□□□□□ -0.04
Col2a1P28481 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.77□□□□□ -0.04
Col2a1P28481 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm27046-201ENSMUST00000182160 463 ntBASIC14.77□□□□□ -0.04
Col2a1P28481 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.77□□□□□ -0.04
Col2a1P28481 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm18827-201ENSMUST00000188341 790 ntBASIC14.77□□□□□ -0.04
Col2a1P28481 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.77□□□□□ -0.04
Col2a1P28481 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col2a1P28481 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.77□□□□□ -0.04
Col2a1P28481 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.77□□□□□ -0.04
Col2a1P28481 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.77□□□□□ -0.04
Col2a1P28481 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col2a1P28481 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.77□□□□□ -0.05
Col2a1P28481 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col2a1P28481 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.77□□□□□ -0.05
Col2a1P28481 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col2a1P28481 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.76□□□□□ -0.05
Col2a1P28481 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.76□□□□□ -0.05
Col2a1P28481 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.76□□□□□ -0.05
Col2a1P28481 Gm27023-201ENSMUST00000182372 285 ntBASIC14.76□□□□□ -0.05
Col2a1P28481 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.76□□□□□ -0.05
Col2a1P28481 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.76□□□□□ -0.05
Col2a1P28481 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col2a1P28481 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col2a1P28481 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.75□□□□□ -0.05
Col2a1P28481 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms