Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm12859-201ENSMUST00000117834 427 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm26464-201ENSMUST00000157094 305 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Gm5866-201ENSMUST00000177881 973 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm5354-201ENSMUST00000182417 973 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl6P27784 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.3□□□□□ -0.76
Ccl6P27784 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm5161-201ENSMUST00000075243 853 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl6P27784 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Ccl6P27784 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl6P27784 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl6P27784 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.3□□□□□ -0.76
Ccl6P27784 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl6P27784 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Ccl6P27784 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Ccl6P27784 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.29□□□□□ -0.76
Ccl6P27784 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.29□□□□□ -0.76
Ccl6P27784 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.29□□□□□ -0.76
Ccl6P27784 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.29□□□□□ -0.76
Ccl6P27784 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ccl6P27784 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Ccl6P27784 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl6P27784 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccl6P27784 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccl6P27784 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Ccl6P27784 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.28□□□□□ -0.76
Ccl6P27784 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ccl6P27784 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl6P27784 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms