Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.01□□□□□ -0.65
Col8a2P25318 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col8a2P25318 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col8a2P25318 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Col8a2P25318 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col8a2P25318 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col8a2P25318 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col8a2P25318 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
Col8a2P25318 Gm12742-201ENSMUST00000117326 410 ntBASIC11□□□□□ -0.65
Col8a2P25318 Gm16202-201ENSMUST00000117532 544 ntBASIC11□□□□□ -0.65
Col8a2P25318 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Gm6161-201ENSMUST00000121942 1102 ntBASIC11□□□□□ -0.65
Col8a2P25318 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Gm6254-201ENSMUST00000168178 1072 ntBASIC11□□□□□ -0.65
Col8a2P25318 Gm6153-201ENSMUST00000172004 1058 ntBASIC11□□□□□ -0.65
Col8a2P25318 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11□□□□□ -0.65
Col8a2P25318 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Col8a2P25318 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col8a2P25318 Gm37922-201ENSMUST00000195596 455 ntBASIC11□□□□□ -0.65
Col8a2P25318 Gm5641-202ENSMUST00000198699 1080 ntBASIC11□□□□□ -0.65
Col8a2P25318 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11□□□□□ -0.65
Col8a2P25318 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Col8a2P25318 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Gm7553-201ENSMUST00000185805 1426 ntBASIC11□□□□□ -0.65
Col8a2P25318 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col8a2P25318 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col8a2P25318 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms