Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm43094-201ENSMUST00000196549 921 ntBASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm11524-201ENSMUST00000119349 807 ntBASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Syt7-204ENSMUST00000223586 1344 ntBASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf1aP25118 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm12403-201ENSMUST00000121384 959 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm19078-201ENSMUST00000206311 727 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.06□□□□□ -0.64
Tnfrsf1aP25118 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms