Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn1P18608 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn1P18608 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn1P18608 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn1P18608 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn1P18608 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn1P18608 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Mir449b-201ENSMUST00000104833 80 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.07□□□□□ -0.48
Hmgn1P18608 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmgn1P18608 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn1P18608 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.06□□□□□ -0.48
Hmgn1P18608 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Gm4995-201ENSMUST00000117247 432 ntBASIC12.06□□□□□ -0.48
Hmgn1P18608 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Gm27741-201ENSMUST00000185060 237 ntBASIC12.06□□□□□ -0.48
Hmgn1P18608 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Gm38144-201ENSMUST00000192790 465 ntBASIC12.06□□□□□ -0.48
Hmgn1P18608 Gm43703-201ENSMUST00000200523 763 ntBASIC12.06□□□□□ -0.48
Hmgn1P18608 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn1P18608 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn1P18608 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms