Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm27680-201ENSMUST00000184192 160 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.93□□□□□ -0.66
Cxcl1P12850 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.93□□□□□ -0.66
Cxcl1P12850 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Cxcl1P12850 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cxcl1P12850 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm14767-201ENSMUST00000121559 586 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm24513-201ENSMUST00000174964 138 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm44771-201ENSMUST00000206975 626 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm17795-201ENSMUST00000214505 757 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Chchd1-203ENSMUST00000224633 557 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Gm5161-201ENSMUST00000075243 853 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.92□□□□□ -0.66
Cxcl1P12850 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.92□□□□□ -0.66
Cxcl1P12850 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cxcl1P12850 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cxcl1P12850 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cxcl1P12850 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms