Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.21□□□□□ -0.77
Ccl1P10146 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.21□□□□□ -0.77
Ccl1P10146 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccl1P10146 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.21□□□□□ -0.77
Ccl1P10146 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.21□□□□□ -0.78
Ccl1P10146 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.21□□□□□ -0.78
Ccl1P10146 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ccl1P10146 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ccl1P10146 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.2□□□□□ -0.78
Ccl1P10146 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.2□□□□□ -0.78
Ccl1P10146 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl1P10146 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Mir5131-201ENSMUST00000175426 93 ntBASIC10.2□□□□□ -0.78
Ccl1P10146 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.2□□□□□ -0.78
Ccl1P10146 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.2□□□□□ -0.78
Ccl1P10146 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.2□□□□□ -0.78
Ccl1P10146 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.2□□□□□ -0.78
Ccl1P10146 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ccl1P10146 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.2□□□□□ -0.78
Ccl1P10146 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl1P10146 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl1P10146 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms