Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxa4P06798 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.99□□□□□ -0.33
Hoxa4P06798 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa4P06798 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.98□□□□□ -0.33
Hoxa4P06798 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gm27731-201ENSMUST00000185192 107 ntBASIC12.98□□□□□ -0.33
Hoxa4P06798 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.98□□□□□ -0.33
Hoxa4P06798 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.98□□□□□ -0.33
Hoxa4P06798 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.98□□□□□ -0.33
Hoxa4P06798 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa4P06798 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa4P06798 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm16479-201ENSMUST00000121706 932 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm7029-201ENSMUST00000173226 450 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm4768-201ENSMUST00000206199 686 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa4P06798 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.97□□□□□ -0.33
Hoxa4P06798 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms