Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PrnpP04925 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.61□□□□□ -0.23
PrnpP04925 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.61□□□□□ -0.23
PrnpP04925 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.61□□□□□ -0.23
PrnpP04925 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Gm13492-201ENSMUST00000119772 665 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PrnpP04925 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.61□□□□□ -0.23
PrnpP04925 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PrnpP04925 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PrnpP04925 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PrnpP04925 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Gm11531-201ENSMUST00000117614 555 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.6□□□□□ -0.23
PrnpP04925 Gm14017-201ENSMUST00000121934 386 ntBASIC13.6□□□□□ -0.23
PrnpP04925 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.6□□□□□ -0.23
PrnpP04925 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Rps4l-202ENSMUST00000204242 789 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PrnpP04925 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.6□□□□□ -0.23
PrnpP04925 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PrnpP04925 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrnpP04925 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrnpP04925 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
PrnpP04925 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PrnpP04925 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrnpP04925 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms