Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
P04224 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
P04224 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.58□□□□□ -0.56
P04224 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
P04224 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
P04224 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.58□□□□□ -0.56
P04224 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.58□□□□□ -0.56
P04224 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.58□□□□□ -0.56
P04224 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
P04224 Rprl2-201ENSMUST00000157150 290 ntBASIC11.58□□□□□ -0.56
P04224 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.58□□□□□ -0.56
P04224 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.58□□□□□ -0.56
P04224 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.58□□□□□ -0.56
P04224 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.58□□□□□ -0.56
P04224 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.58□□□□□ -0.56
P04224 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
P04224 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
P04224 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
P04224 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.58□□□□□ -0.56
P04224 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
P04224 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.58□□□□□ -0.56
P04224 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.58□□□□□ -0.56
P04224 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P04224 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.57□□□□□ -0.56
P04224 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
P04224 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
P04224 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.57□□□□□ -0.56
P04224 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 BC001981-202ENSMUST00000191393 1545 ntBASIC11.57□□□□□ -0.56
P04224 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.57□□□□□ -0.56
P04224 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
P04224 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.57□□□□□ -0.56
P04224 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Gm27741-201ENSMUST00000185060 237 ntBASIC11.57□□□□□ -0.56
P04224 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.57□□□□□ -0.56
P04224 Gm18206-201ENSMUST00000207027 926 ntBASIC11.57□□□□□ -0.56
P04224 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.57□□□□□ -0.56
P04224 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.57□□□□□ -0.56
P04224 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.57□□□□□ -0.56
P04224 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
P04224 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
P04224 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
P04224 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.57□□□□□ -0.56
P04224 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.57□□□□□ -0.56
P04224 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
P04224 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms