Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.9■□□□□ 0.14
Col4a1P02463 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col4a1P02463 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col4a1P02463 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.9■□□□□ 0.14
Col4a1P02463 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.9■□□□□ 0.14
Col4a1P02463 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Gm27530-201ENSMUST00000184096 98 ntBASIC15.9■□□□□ 0.14
Col4a1P02463 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.9■□□□□ 0.14
Col4a1P02463 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Col4a1P02463 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Col4a1P02463 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Col4a1P02463 Gm13996-201ENSMUST00000118456 430 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Gm27023-201ENSMUST00000182372 285 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.89■□□□□ 0.13
Col4a1P02463 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Matn2-206ENSMUST00000228570 2798 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col4a1P02463 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.89■□□□□ 0.13
Col4a1P02463 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col4a1P02463 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.89■□□□□ 0.13
Col4a1P02463 Gm20426-201ENSMUST00000173657 440 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col4a1P02463 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.89■□□□□ 0.13
Col4a1P02463 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.89■□□□□ 0.13
Col4a1P02463 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.89■□□□□ 0.13
Col4a1P02463 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col4a1P02463 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Col4a1P02463 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.88■□□□□ 0.13
Col4a1P02463 Rprl1-202ENSMUST00000198476 238 ntBASIC15.88■□□□□ 0.13
Col4a1P02463 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a1P02463 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col4a1P02463 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.88■□□□□ 0.13
Col4a1P02463 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a1P02463 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.87■□□□□ 0.13
Col4a1P02463 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Col4a1P02463 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.87■□□□□ 0.13
Col4a1P02463 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms