Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Gm15957-201ENSMUST00000118893 974 ntBASIC9.63□□□□□ -0.87
TcraP01849 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
TcraP01849 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
TcraP01849 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
TcraP01849 Gm18737-201ENSMUST00000173594 937 ntBASIC9.63□□□□□ -0.87
TcraP01849 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.63□□□□□ -0.87
TcraP01849 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.63□□□□□ -0.87
TcraP01849 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TcraP01849 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TcraP01849 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TcraP01849 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
TcraP01849 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
TcraP01849 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
TcraP01849 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.62□□□□□ -0.87
TcraP01849 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.62□□□□□ -0.87
TcraP01849 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.62□□□□□ -0.87
TcraP01849 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm15483-201ENSMUST00000120338 456 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm15467-201ENSMUST00000120582 445 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.62□□□□□ -0.87
TcraP01849 Gm11025-201ENSMUST00000140773 466 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm27920-201ENSMUST00000183953 96 ntBASIC9.62□□□□□ -0.87
TcraP01849 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TcraP01849 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TcraP01849 Gm17968-201ENSMUST00000194902 784 ntBASIC9.62□□□□□ -0.87
TcraP01849 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.62□□□□□ -0.87
TcraP01849 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.62□□□□□ -0.87
TcraP01849 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TcraP01849 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.62□□□□□ -0.87
TcraP01849 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.62□□□□□ -0.87
TcraP01849 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.62□□□□□ -0.87
TcraP01849 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TcraP01849 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms