Protein–RNA interactions for Protein: P01797

Ig heavy chain V-III region U61, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01797 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01797 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P01797 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11□□□□□ -0.65
P01797 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P01797 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gm13730-201ENSMUST00000121036 1462 ntBASIC11□□□□□ -0.65
P01797 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gm37015-201ENSMUST00000192763 1521 ntBASIC11□□□□□ -0.65
P01797 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P01797 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
P01797 Gm38037-201ENSMUST00000192600 1624 ntBASIC11□□□□□ -0.65
P01797 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11□□□□□ -0.65
P01797 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11□□□□□ -0.65
P01797 Mir1938-201ENSMUST00000158746 100 ntBASIC11□□□□□ -0.65
P01797 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11□□□□□ -0.65
P01797 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11□□□□□ -0.65
P01797 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P01797 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11□□□□□ -0.65
P01797 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
P01797 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
P01797 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P01797 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P01797 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11□□□□□ -0.65
P01797 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
P01797 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01797 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01797 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11□□□□□ -0.65
P01797 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
P01797 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.99□□□□□ -0.65
P01797 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.99□□□□□ -0.65
P01797 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Gm11814-201ENSMUST00000119515 929 ntBASIC10.99□□□□□ -0.65
P01797 Gm12485-201ENSMUST00000119641 291 ntBASIC10.99□□□□□ -0.65
P01797 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
P01797 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.99□□□□□ -0.65
P01797 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.99□□□□□ -0.65
P01797 Gm27839-201ENSMUST00000184242 106 ntBASIC10.99□□□□□ -0.65
P01797 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
P01797 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 AY702102-202ENSMUST00000194651 1173 ntBASIC10.99□□□□□ -0.65
P01797 Gm43094-201ENSMUST00000196549 921 ntBASIC10.99□□□□□ -0.65
P01797 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.99□□□□□ -0.65
P01797 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.99□□□□□ -0.65
P01797 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.99□□□□□ -0.65
P01797 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
P01797 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
P01797 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P01797 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
P01797 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms