Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm5745-201ENSMUST00000183748 313 ntBASIC13.31□□□□□ -0.28
Dnmt3aO88508 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm26315-201ENSMUST00000083890 321 ntBASIC13.31□□□□□ -0.28
Dnmt3aO88508 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.31□□□□□ -0.28
Dnmt3aO88508 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm11478-201ENSMUST00000117851 599 ntBASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm15806-201ENSMUST00000120696 955 ntBASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm9002-201ENSMUST00000178437 499 ntBASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm8463-201ENSMUST00000208573 613 ntBASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.3□□□□□ -0.28
Dnmt3aO88508 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Dnmt3aO88508 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Paupar-201ENSMUST00000194826 3482 ntBASIC13.29□□□□□ -0.28
Dnmt3aO88508 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.29□□□□□ -0.28
Dnmt3aO88508 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Dnmt3aO88508 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms