Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm8810-201ENSMUST00000172895 754 ntBASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm27839-201ENSMUST00000184242 106 ntBASIC13.05□□□□□ -0.32
Pdlim1O70400 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm7561-201ENSMUST00000211203 886 ntBASIC13.05□□□□□ -0.32
Pdlim1O70400 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Gm17150-201ENSMUST00000165577 381 ntBASIC13.04□□□□□ -0.32
Pdlim1O70400 Gm37922-201ENSMUST00000195596 455 ntBASIC13.04□□□□□ -0.32
Pdlim1O70400 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.04□□□□□ -0.32
Pdlim1O70400 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.04□□□□□ -0.32
Pdlim1O70400 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim1O70400 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Pdlim1O70400 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.03□□□□□ -0.32
Pdlim1O70400 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.03□□□□□ -0.32
Pdlim1O70400 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm24644-201ENSMUST00000157114 139 ntBASIC13.03□□□□□ -0.32
Pdlim1O70400 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm29649-201ENSMUST00000185649 419 ntBASIC13.03□□□□□ -0.32
Pdlim1O70400 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms