Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm28630-201ENSMUST00000187806 498 ntBASIC11.74□□□□□ -0.53
Lsm2O35900 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm2O35900 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm2O35900 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm2O35900 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.74□□□□□ -0.53
Lsm2O35900 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm2O35900 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm2O35900 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm2O35900 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm2O35900 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm2O35900 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.73□□□□□ -0.53
Lsm2O35900 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.73□□□□□ -0.53
Lsm2O35900 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm43125-201ENSMUST00000201724 730 ntBASIC11.73□□□□□ -0.53
Lsm2O35900 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.73□□□□□ -0.53
Lsm2O35900 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm2O35900 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Lsm2O35900 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm2O35900 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.72□□□□□ -0.53
Lsm2O35900 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.72□□□□□ -0.53
Lsm2O35900 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms