Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nr1i3O35627 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nr1i3O35627 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Nr1i3O35627 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nr1i3O35627 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Gm20949-201ENSMUST00000206478 952 ntBASIC14.18□□□□□ -0.14
Nr1i3O35627 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.18□□□□□ -0.14
Nr1i3O35627 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.18□□□□□ -0.14
Nr1i3O35627 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nr1i3O35627 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nr1i3O35627 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm13689-201ENSMUST00000119360 685 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm11978-201ENSMUST00000122315 466 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.17□□□□□ -0.14
Nr1i3O35627 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Nr1i3O35627 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nr1i3O35627 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Nr1i3O35627 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.17□□□□□ -0.14
Nr1i3O35627 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nr1i3O35627 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nr1i3O35627 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nr1i3O35627 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.16□□□□□ -0.14
Nr1i3O35627 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms