Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Npc1O35604 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.9□□□□□ -0.34
Npc1O35604 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.9□□□□□ -0.34
Npc1O35604 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Gm29649-201ENSMUST00000185649 419 ntBASIC12.9□□□□□ -0.34
Npc1O35604 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.9□□□□□ -0.34
Npc1O35604 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Npc1O35604 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.9□□□□□ -0.34
Npc1O35604 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.9□□□□□ -0.34
Npc1O35604 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Gm25857-201ENSMUST00000082788 129 ntBASIC12.9□□□□□ -0.34
Npc1O35604 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Npc1O35604 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Npc1O35604 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.9□□□□□ -0.34
Npc1O35604 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Npc1O35604 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Npc1O35604 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Npc1O35604 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.89□□□□□ -0.35
Npc1O35604 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Npc1O35604 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.89□□□□□ -0.35
Npc1O35604 Gm8652-201ENSMUST00000181363 964 ntBASIC12.89□□□□□ -0.35
Npc1O35604 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Npc1O35604 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.89□□□□□ -0.35
Npc1O35604 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.89□□□□□ -0.35
Npc1O35604 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Npc1O35604 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.89□□□□□ -0.35
Npc1O35604 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Npc1O35604 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Npc1O35604 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.88□□□□□ -0.35
Npc1O35604 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Npc1O35604 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Npc1O35604 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.88□□□□□ -0.35
Npc1O35604 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Gm10156-201ENSMUST00000122364 462 ntBASIC12.88□□□□□ -0.35
Npc1O35604 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.88□□□□□ -0.35
Npc1O35604 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.88□□□□□ -0.35
Npc1O35604 Gm29608-201ENSMUST00000190444 463 ntBASIC12.88□□□□□ -0.35
Npc1O35604 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.88□□□□□ -0.35
Npc1O35604 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Npc1O35604 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms