Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.79□□□□□ -0.52
Alx4O35137 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.79□□□□□ -0.52
Alx4O35137 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.79□□□□□ -0.52
Alx4O35137 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.79□□□□□ -0.52
Alx4O35137 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Alx4O35137 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Alx4O35137 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Gm27430-201ENSMUST00000184585 107 ntBASIC11.78□□□□□ -0.52
Alx4O35137 Gm37935-201ENSMUST00000192012 982 ntBASIC11.78□□□□□ -0.52
Alx4O35137 Gm44333-201ENSMUST00000197168 107 ntBASIC11.78□□□□□ -0.52
Alx4O35137 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.78□□□□□ -0.52
Alx4O35137 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Alx4O35137 Gm17795-201ENSMUST00000214505 757 ntBASIC11.78□□□□□ -0.52
Alx4O35137 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.78□□□□□ -0.52
Alx4O35137 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.78□□□□□ -0.52
Alx4O35137 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Alx4O35137 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Alx4O35137 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Alx4O35137 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.78□□□□□ -0.52
Alx4O35137 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.78□□□□□ -0.52
Alx4O35137 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Alx4O35137 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.78□□□□□ -0.52
Alx4O35137 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Alx4O35137 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.77□□□□□ -0.52
Alx4O35137 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Alx4O35137 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Alx4O35137 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Alx4O35137 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Alx4O35137 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Alx4O35137 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.77□□□□□ -0.52
Alx4O35137 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Alx4O35137 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.77□□□□□ -0.53
Alx4O35137 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Alx4O35137 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Alx4O35137 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.77□□□□□ -0.53
Alx4O35137 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.77□□□□□ -0.53
Alx4O35137 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms