Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hdac1O09106 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.71■□□□□ 0.11
Hdac1O09106 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.71■□□□□ 0.11
Hdac1O09106 Gm26308-201ENSMUST00000157768 69 ntBASIC15.71■□□□□ 0.11
Hdac1O09106 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Gm27306-201ENSMUST00000183970 107 ntBASIC15.71■□□□□ 0.11
Hdac1O09106 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.71■□□□□ 0.11
Hdac1O09106 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.71■□□□□ 0.11
Hdac1O09106 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hdac1O09106 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.71■□□□□ 0.1
Hdac1O09106 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.71■□□□□ 0.1
Hdac1O09106 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hdac1O09106 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hdac1O09106 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Hdac1O09106 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.7■□□□□ 0.1
Hdac1O09106 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hdac1O09106 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hdac1O09106 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.7■□□□□ 0.1
Hdac1O09106 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.7■□□□□ 0.1
Hdac1O09106 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hdac1O09106 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac1O09106 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.69■□□□□ 0.1
Hdac1O09106 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hdac1O09106 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.69■□□□□ 0.1
Hdac1O09106 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Hdac1O09106 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hdac1O09106 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.69■□□□□ 0.1
Hdac1O09106 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac1O09106 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hdac1O09106 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hdac1O09106 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hdac1O09106 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms