Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22065-201ENSMUST00000103753 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22066-201ENSMUST00000103761 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24932-201ENSMUST00000103763 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24115-201ENSMUST00000103799 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22190-201ENSMUST00000103827 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22191-201ENSMUST00000103831 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24721-201ENSMUST00000103849 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm28018-201ENSMUST00000103869 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm26399-201ENSMUST00000103937 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25948-201ENSMUST00000175334 112 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25349-201ENSMUST00000177728 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm23616-201ENSMUST00000177797 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25871-201ENSMUST00000177816 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24752-201ENSMUST00000178240 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24496-201ENSMUST00000178287 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25649-201ENSMUST00000178476 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25548-201ENSMUST00000178681 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm23147-201ENSMUST00000178841 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm26095-201ENSMUST00000179270 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22171-201ENSMUST00000179283 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm23936-201ENSMUST00000179354 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm22619-201ENSMUST00000179516 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25255-201ENSMUST00000179579 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24755-201ENSMUST00000179691 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm26506-201ENSMUST00000179692 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm25086-201ENSMUST00000179931 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm23243-201ENSMUST00000180047 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24659-201ENSMUST00000180212 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm24169-201ENSMUST00000180244 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm23689-201ENSMUST00000180354 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm27359-201ENSMUST00000184153 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm27785-201ENSMUST00000184268 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm27466-201ENSMUST00000184396 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm27525-201ENSMUST00000184465 107 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm27703-201ENSMUST00000184836 110 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm9229-201ENSMUST00000222777 126 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa8J3QNX5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Gm6415-201ENSMUST00000118488 348 ntBASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Gm24420-201ENSMUST00000176676 59 ntBASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Mir7221-201ENSMUST00000184009 72 ntBASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Gm10766-202ENSMUST00000194123 606 ntBASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa8J3QNX5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms