Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm34767-201ENSMUST00000191813 1062 ntBASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Gm28450-201ENSMUST00000187349 638 ntBASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm26361-201ENSMUST00000158868 186 ntBASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm45925-201ENSMUST00000218882 744 ntBASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 AC154222.2-201ENSMUST00000225848 607 ntBASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Gm9025-201ENSMUST00000122415 1575 ntBASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ccdc180J3QNE4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Gm8959-201ENSMUST00000213150 571 ntBASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC23.65■■□□□ 1.38
Ccdc180J3QNE4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Gm12314-201ENSMUST00000118104 538 ntBASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Gm8494-201ENSMUST00000178171 1233 ntBASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC23.64■■□□□ 1.38
Ccdc180J3QNE4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Gm4782-201ENSMUST00000168705 2046 ntBASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Gm12380-201ENSMUST00000119012 544 ntBASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc180J3QNE4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc180J3QNE4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms