Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh9F8VPK8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh9F8VPK8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm28760-201ENSMUST00000185995 736 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm7730-201ENSMUST00000212486 454 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh9F8VPK8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms