Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh1F7BJK1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh1F7BJK1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh1F7BJK1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Pcdh1F7BJK1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh1F7BJK1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm27321-201ENSMUST00000185021 205 ntBASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh1F7BJK1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms