Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.77■□□□□ 0.12
Ube4aE9Q735 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.77■□□□□ 0.12
Ube4aE9Q735 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.77■□□□□ 0.12
Ube4aE9Q735 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4aE9Q735 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.77■□□□□ 0.11
Ube4aE9Q735 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.77■□□□□ 0.11
Ube4aE9Q735 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4aE9Q735 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm12291-201ENSMUST00000121627 311 ntBASIC15.76■□□□□ 0.11
Ube4aE9Q735 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm23363-201ENSMUST00000175024 79 ntBASIC15.76■□□□□ 0.11
Ube4aE9Q735 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.76■□□□□ 0.11
Ube4aE9Q735 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4aE9Q735 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm13492-201ENSMUST00000119772 665 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm26956-201ENSMUST00000182176 986 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm5904-201ENSMUST00000210286 865 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms