Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdr1E9Q0B4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Mir125a-201ENSMUST00000083545 68 ntBASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdr1E9Q0B4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Rpph1-201ENSMUST00000175096 319 ntBASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdr1E9Q0B4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.96□□□□□ -0.34
Cdr1E9Q0B4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.96□□□□□ -0.34
Cdr1E9Q0B4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdr1E9Q0B4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdr1E9Q0B4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdr1E9Q0B4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms