Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm3222-201ENSMUST00000071282 990 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm24420-201ENSMUST00000176676 59 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm28043E0CXC2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm15240-201ENSMUST00000118156 720 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm21854-201ENSMUST00000179901 471 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm9522-201ENSMUST00000182394 926 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm20445-201ENSMUST00000061905 565 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms