Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn7aB1AYL1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm17040-202ENSMUST00000170597 889 ntBASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm5070-201ENSMUST00000177599 862 ntBASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn7aB1AYL1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gm44958-201ENSMUST00000203734 736 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gm27530-201ENSMUST00000184096 98 ntBASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn7aB1AYL1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm9230-201ENSMUST00000188228 532 ntBASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm43378-201ENSMUST00000199336 582 ntBASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms