Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm5616-201ENSMUST00000165252 384 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm8741-201ENSMUST00000174736 384 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm15003-201ENSMUST00000118884 446 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm26368-201ENSMUST00000157826 118 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm24845-201ENSMUST00000158034 109 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm22144-201ENSMUST00000157402 102 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm29808-201ENSMUST00000194419 468 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm12419-201ENSMUST00000116649 636 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm27627-201ENSMUST00000183644 150 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm43520-201ENSMUST00000197996 164 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms