Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Gm7862-201ENSMUST00000121461 292 ntBASIC11.93□□□□□ -0.5
Smim17A0A504 Mir8098-201ENSMUST00000184011 137 ntBASIC11.93□□□□□ -0.5
Smim17A0A504 Gm6443-201ENSMUST00000203599 874 ntBASIC11.93□□□□□ -0.5
Smim17A0A504 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.93□□□□□ -0.5
Smim17A0A504 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.93□□□□□ -0.5
Smim17A0A504 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.93□□□□□ -0.5
Smim17A0A504 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smim17A0A504 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.93□□□□□ -0.5
Smim17A0A504 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smim17A0A504 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smim17A0A504 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.92□□□□□ -0.5
Smim17A0A504 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.92□□□□□ -0.5
Smim17A0A504 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.92□□□□□ -0.5
Smim17A0A504 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.92□□□□□ -0.5
Smim17A0A504 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.92□□□□□ -0.5
Smim17A0A504 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 AA543401-201ENSMUST00000164248 1269 ntBASIC11.92□□□□□ -0.5
Smim17A0A504 Gm10060-201ENSMUST00000212002 111 ntBASIC11.92□□□□□ -0.5
Smim17A0A504 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim17A0A504 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Smim17A0A504 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm7153-201ENSMUST00000117092 455 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.91□□□□□ -0.5
Smim17A0A504 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm27920-201ENSMUST00000183953 96 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.91□□□□□ -0.5
Smim17A0A504 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim17A0A504 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim17A0A504 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms