Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm5161-201ENSMUST00000075243 853 ntBASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trbv29A0A0G2LB96 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Gm2213-201ENSMUST00000197485 688 ntBASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.97□□□□□ -0.65
Trbv29A0A0G2LB96 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Gm4875-201ENSMUST00000118257 786 ntBASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Gm38294-201ENSMUST00000192831 381 ntBASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trbv29A0A0G2LB96 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Trbv29A0A0G2LB96 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trbv29A0A0G2LB96 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms